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LOC102551574 uncharacterized LOC102551574 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102551574, updated on 17-Aug-2024

Summary

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Symbol
LOC102551574provided by RGD
Full Name
uncharacterized LOC102551574provided by RGD
Primary source
RGD:7751266
See related
EnsemblRapid:ENSRNOG00000081410 AllianceGenome:RGD:7751266
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Adrenal (RPKM 23.7), Lung (RPKM 21.8) and 9 other tissues See more
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Genomic context

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See LOC102551574 in Genome Data Viewer
Location:
7q34
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (101991507..102048895, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (100102553..100159947, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (109252749..109258990, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene NOP2 nucleolar protein, pseudogene 3 Neighboring gene zinc finger and AT hook domain containing Neighboring gene uncharacterized LOC120093680 Neighboring gene microRNA 30b Neighboring gene microRNA 30d Neighboring gene H3.7 histone like Neighboring gene calmodulin 1, pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    101991507..102048895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005487226.2 RNA Sequence

    Related
    ENSRNOT00000173540.1

  2. XR_355758.4 RNA Sequence

    Related
    ENSRNOT00000138151.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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