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LOC102552083 uncharacterized LOC102552083 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102552083, updated on 17-Aug-2024

Summary

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Symbol
LOC102552083provided by RGD
Full Name
uncharacterized LOC102552083provided by RGD
Primary source
RGD:7508589
See related
AllianceGenome:RGD:7508589
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Spleen (RPKM 8.4) and Lung (RPKM 2.1) See more
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Genomic context

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See LOC102552083 in Genome Data Viewer
Location:
11q22
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (84768019..84774742, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (71263450..71269923, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (74871214..74877983, complement)

Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene OPA1, mitochondrial dynamin like GTPase Neighboring gene ATPase 13A4 Neighboring gene interleukin 13 receptor subunit alpha 1, pseudogene 1 Neighboring gene ATPase 13A5 Neighboring gene phospholipase A and acyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086029.1 Reference GRCr8

    Range
    84768019..84774742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005491418.2 RNA Sequence

  2. XR_005491419.2 RNA Sequence

  3. XR_005491420.2 RNA Sequence

  4. XR_005491421.2 RNA Sequence

  5. XR_010056168.1 RNA Sequence

  6. XR_005491430.2 RNA Sequence

  7. XR_005491426.2 RNA Sequence

  8. XR_005491425.2 RNA Sequence

  9. XR_005491427.2 RNA Sequence

  10. XR_005491417.2 RNA Sequence

  11. XR_005491416.2 RNA Sequence

  12. XR_005491428.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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