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LOC102555599 olfactory receptor 5L1-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 102555599, updated on 9-Dec-2024

Summary

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Symbol
LOC102555599provided by RGD
Full Name
olfactory receptor 5L1-likeprovided by RGD
Primary source
RGD:7579074
See related
EnsemblRapid:ENSRNOG00000080593 AllianceGenome:RGD:7579074
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in plasma membrane. Orthologous to human OR5L1 (olfactory receptor family 5 subfamily L member 1) and OR5L2 (olfactory receptor family 5 subfamily L member 2). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See LOC102555599 in Genome Data Viewer
Location:
3q24
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (93901081..93902019, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (73444799..73445737, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (76113964..76114902, complement)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 5 subfamily L member 13 Neighboring gene olfactory receptor family 5 subfamily L member 14B Neighboring gene olfactory receptor family 5 subfamily L member 14, pseudogene 1 Neighboring gene olfactory receptor family 5 subfamily D member 47 Neighboring gene olfactory receptor family 9 subfamily M member 1, pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
  
enables odorant binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in detection of chemical stimulus involved in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
  
involved_in sensory perception of smell IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
olfactory receptor 5L1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    93901081..93902019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006234492.1 → XP_006234554.1  olfactory receptor 5L1-like

    UniProtKB/TrEMBL
    M0RBM5
    Related
    ENSRNOP00000066966.3, ENSRNOT00000071564.3
    Conserved Domains (2) summary
    pfam00001
    Location:42 → 290
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:33 → 308
    7tm_4; Olfactory receptor
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials