U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TMEM9 transmembrane protein 9 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102577423, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
TMEM9
Gene description
transmembrane protein 9
Locus tag
Y1Q_0014974
See related
EnsemblRapid:ENSAMIG00015003814
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TMEM9 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 14 NC_081837.1 (32808406..32826829)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711201.1 (3293866..3313507, complement)

Chromosome 14 - NC_081837.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin like and fibronectin type III domain containing 1 Neighboring gene uncharacterized LOC106737678 Neighboring gene sperm acrosome membrane-associated protein 3 Neighboring gene achaete-scute family bHLH transcription factor 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
proton-transporting V-type ATPase complex assembly regulator TMEM9

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081837.1 Reference rAllMis1 Primary Assembly

    Range
    32808406..32826829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019492601.2 → XP_019348146.1  proton-transporting V-type ATPase complex assembly regulator TMEM9 isoform X2

    Related
    ENSAMIP00015004634.1, ENSAMIT00015007004.1

  2. XM_014609407.3 → XP_014464893.1  proton-transporting V-type ATPase complex assembly regulator TMEM9 isoform X1

    UniProtKB/TrEMBL
    A0A151N9M5
    Related
    ENSAMIP00015004633.1, ENSAMIT00015007003.1
    Conserved Domains (1) summary
    pfam05434
    Location:106 → 243
    Tmemb_9; TMEM9

  3. XM_014609410.3 → XP_014464896.1  proton-transporting V-type ATPase complex assembly regulator TMEM9 isoform X2

    Related
    ENSAMIP00015004636.1, ENSAMIT00015007006.1
    Conserved Domains (1) summary
    pfam05434
    Location:54 → 191
    Tmemb_9; TMEM9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.