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Emx2os Emx2 opposite strand/antisense RNA [ Rattus norvegicus (Norway rat) ]

Gene ID: 103691392, updated on 17-Aug-2024

Summary

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Official Symbol
Emx2osprovided by RGD
Official Full Name
Emx2 opposite strand/antisense RNAprovided by RGD
Primary source
RGD:9281507
See related
AllianceGenome:RGD:9281507
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Kidney (RPKM 45.4), Uterus (RPKM 37.1) and 5 other tissues See more
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Genomic context

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See Emx2os in Genome Data Viewer
Location:
1q55
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (268555719..268612889, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (258569637..258626810, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (280573647..280634146, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene PDZ domain containing 8 Neighboring gene uncharacterized LOC134485265 Neighboring gene uncharacterized LOC120100068 Neighboring gene uncharacterized LOC134485266 Neighboring gene uncharacterized LOC108349711 Neighboring gene empty spiracles homeobox 2 Neighboring gene ribosomal protein S9, pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • Emx2 opposite strand/antisense transcript (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_176829.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    268555719..268612889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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