U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC106737520 adhesion G protein-coupled receptor E3 [ Alligator mississippiensis (American alligator) ]

Gene ID: 106737520, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC106737520
Gene description
adhesion G protein-coupled receptor E3
Locus tag
Y1Q_0014927
See related
EnsemblRapid:ENSAMIG00015004115
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC106737520 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 14 NC_081837.1 (35074073..35119704, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711201.1 (1357578..1403090)

Chromosome 14 - NC_081837.1Genomic Context describing neighboring genes Neighboring gene embryonic pepsinogen-like Neighboring gene embryonic pepsinogen-like Neighboring gene potassium voltage-gated channel subfamily A member 10 Neighboring gene potassium voltage-gated channel subfamily A member 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
adhesion G protein-coupled receptor E3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081837.1 Reference rAllMis1 Primary Assembly

    Range
    35074073..35119704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019492592.2 → XP_019348137.1  adhesion G protein-coupled receptor E3 isoform X3

    UniProtKB/TrEMBL
    A0A151N8H6, A0A151N8H9

  2. XM_019492591.2 → XP_019348136.1  adhesion G protein-coupled receptor E3 isoform X2

    UniProtKB/TrEMBL
    A0A151N8H9

  3. XM_019492593.2 → XP_019348138.1  adhesion G protein-coupled receptor E3 isoform X4

    UniProtKB/TrEMBL
    A0A151N8H9

  4. XM_014605424.3 → XP_014460910.2  adhesion G protein-coupled receptor E3 isoform X1

    UniProtKB/TrEMBL
    A0A151N8H9, A0A151N8P3
    Related
    ENSAMIP00015004931.1, ENSAMIT00015007424.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases