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LOC106737678 uncharacterized LOC106737678 [ Alligator mississippiensis (American alligator) ]

Gene ID: 106737678, updated on 3-Dec-2024

Summary

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Gene symbol
LOC106737678
Gene description
uncharacterized LOC106737678
Locus tag
Y1Q_0014975
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
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Genomic context

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See LOC106737678 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 14 NC_081837.1 (32769913..32807204, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711201.1 (3313578..3352241)

Chromosome 14 - NC_081837.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109284338 Neighboring gene immunoglobulin like and fibronectin type III domain containing 1 Neighboring gene transmembrane protein 9 Neighboring gene achaete-scute family bHLH transcription factor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC106737678
Names
glutamate 5-kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081837.1 Reference rAllMis1 Primary Assembly

    Range
    32769913..32807204 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019492498.2 → XP_019348043.2  uncharacterized protein LOC106737678 isoform X1

    UniProtKB/TrEMBL
    A0A151N8T7

  2. XM_019492500.2 → XP_019348045.2  uncharacterized protein LOC106737678 isoform X2

Nucleotide Protein
Heading Accession and Version

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