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LOC114773267 epidermal differentiation-specific protein-like [ Denticeps clupeoides (denticle herring) ]

Gene ID: 114773267, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114773267
Gene description
epidermal differentiation-specific protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Denticeps clupeoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Denticipitoidei; Denticipitidae; Denticeps
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Genomic context

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See LOC114773267 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current fDenClu1.1 (GCF_900700375.1) Unplaced Scaffold NW_021629749.1 (36039..37486)

NW_021629749.1Genomic Context describing neighboring genes Neighboring gene epidermal differentiation-specific protein-like Neighboring gene epidermal differentiation-specific protein-like Neighboring gene otoferlin-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021629749 Unplaced Scaffold Reference fDenClu1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of eye lens IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lens development in camera-type eye IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epidermal differentiation-specific protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Denticeps clupeoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fDenClu1.1

Genomic

  1. NW_021629749.1 Reference fDenClu1.1

    Range
    36039..37486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028965793.1 → XP_028821626.1  epidermal differentiation-specific protein-like

    Conserved Domains (2) summary
    smart00247
    Location:5 → 80
    XTALbg; Beta/gamma crystallins
    cl03107
    Location:168 → 325
    ETX_MTX2; Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2
Nucleotide Protein
Heading Accession and Version

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