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UNC5C unc-5 netrin receptor C [ Phasianus colchicus (ring-necked pheasant) ]

Gene ID: 116231289, updated on 27-Jul-2024

Summary

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Gene symbol
UNC5C
Gene description
unc-5 netrin receptor C
See related
Ensembl:ENSPCLG00000011937
Gene type
protein coding
RefSeq status
MODEL
Organism
Phasianus colchicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Phasianus
Orthologs
human mouse all
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Genomic context

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See UNC5C in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM414374v1 (GCF_004143745.1) Unplaced Scaffold NW_022205396.1 (14452280..14540087, complement)

NW_022205396.1Genomic Context describing neighboring genes Neighboring gene PDZ and LIM domain 5 Neighboring gene bone morphogenetic protein receptor type 1B Neighboring gene uncharacterized LOC116231278

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022205396 Unplaced Scaffold Reference ASM414374v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables netrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in netrin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
netrin receptor UNC5C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phasianus colchicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM414374v1 Primary Assembly

Genomic

  1. NW_022205396.1 Reference ASM414374v1 Primary Assembly

    Range
    14452280..14540087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031596969.1 → XP_031452829.1  netrin receptor UNC5C

    UniProtKB/TrEMBL
    A0A669Q483
    Related
    ENSPCLP00000014585.1, ENSPCLT00000019279.1
    Conserved Domains (5) summary
    smart00218
    Location:508 → 611
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    smart00209
    Location:243 → 294
    TSP1; Thrombospondin type 1 repeats
    cd08799
    Location:824 → 906
    Death_UNC5C; Death domain found in Uncoordinated-5C
    pfam17217
    Location:658 → 797
    UPA; UPA domain
    cl11960
    Location:151 → 237
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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