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PHSY_002545 hypothetical protein [ Pseudozyma hubeiensis SY62 ]

Gene ID: 24107838, updated on 9-Nov-2023

Summary

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Gene symbol
PHSY_002545
Gene description
hypothetical protein
Locus tag
PHSY_002545
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Pseudozyma hubeiensis SY62 (strain: SY62)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma
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Genomic context

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See PHSY_002545 in Genome Data Viewer
Exon count:
1

NW_012133806.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene golgi membrane protein Neighboring gene carbamoyl-phosphate synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012133806.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft Genome Sequence of the Basidiomycetous Yeast-Like Fungus Pseudozyma hubeiensis SY62, Which Produces an Abundant Amount of the Biosurfactant Mannosylerythritol Lipids. Konishi M, et al. Genome Announc, 2013 Jun 27. PMID 23814110, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_012133806.1 Reference assembly

    Range
    79923..81083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012333169.1 → XP_012188559.1  hypothetical protein PHSY_002545 [Pseudozyma hubeiensis SY62]

    See identical proteins and their annotated locations for XP_012188559.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R9P1H3
    Conserved Domains (1) summary
    pfam00046
    Location:91 → 144
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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