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PHSY_007510 ubiquitin carboxyl-terminal hydrolase 2 [ Pseudozyma hubeiensis SY62 ]

Gene ID: 24112773, updated on 9-Nov-2023

Summary

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Gene symbol
PHSY_007510
Gene description
ubiquitin carboxyl-terminal hydrolase 2
Locus tag
PHSY_007510
Gene type
protein coding
RNA name
ubiquitin carboxyl-terminal hydrolase 2
RefSeq status
PROVISIONAL
Organism
Pseudozyma hubeiensis SY62 (strain: SY62)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma
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Genomic context

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See PHSY_007510 in Genome Data Viewer
Exon count:
1

NW_012133852.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012133852.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft Genome Sequence of the Basidiomycetous Yeast-Like Fungus Pseudozyma hubeiensis SY62, Which Produces an Abundant Amount of the Biosurfactant Mannosylerythritol Lipids. Konishi M, et al. Genome Announc, 2013 Jun 27. PMID 23814110, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ubiquitin carboxyl-terminal hydrolase 2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_012133852.1 Reference assembly

    Range
    304298..308557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012338104.1 → XP_012193494.1  ubiquitin carboxyl-terminal hydrolase 2 [Pseudozyma hubeiensis SY62]

    See identical proteins and their annotated locations for XP_012193494.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R9PF98
    Conserved Domains (6) summary
    COG5560
    Location:240 → 1318
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cd02674
    Location:1133 → 1315
    Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    cl02553
    Location:536 → 721
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:240 → 331
    DUSP; DUSP domain
    pfam14533
    Location:709 → 799
    USP7_C2; Ubiquitin-specific protease C-terminal
    pfam14920
    Location:52 → 160
    MTBP_C; MDM2-binding
Nucleotide Protein
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