U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PHSY_007514 thioredoxin [ Pseudozyma hubeiensis SY62 ]

Gene ID: 24112777, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
PHSY_007514
Gene description
thioredoxin
Locus tag
PHSY_007514
Gene type
protein coding
RNA name
thioredoxin
RefSeq status
PROVISIONAL
Organism
Pseudozyma hubeiensis SY62 (strain: SY62)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PHSY_007514 in Genome Data Viewer
Exon count:
2

NW_012133852.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene THO complex subunit 2 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012133852.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Draft Genome Sequence of the Basidiomycetous Yeast-Like Fungus Pseudozyma hubeiensis SY62, Which Produces an Abundant Amount of the Biosurfactant Mannosylerythritol Lipids. Konishi M, et al. Genome Announc, 2013 Jun 27. PMID 23814110, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
thioredoxin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_012133852.1 Reference assembly

    Range
    315730..316934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012338108.1 → XP_012193498.1  thioredoxin [Pseudozyma hubeiensis SY62]

    See identical proteins and their annotated locations for XP_012193498.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R9PEZ3
    Conserved Domains (2) summary
    pfam04756
    Location:237 → 367
    OST3_OST6; OST3 / OST6 family
    cl00388
    Location:154 → 206
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases