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PHSY_007522 hypothetical protein [ Pseudozyma hubeiensis SY62 ]

Gene ID: 24112785, updated on 9-Nov-2023

Summary

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Gene symbol
PHSY_007522
Gene description
hypothetical protein
Locus tag
PHSY_007522
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Pseudozyma hubeiensis SY62 (strain: SY62)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma
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Genomic context

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See PHSY_007522 in Genome Data Viewer
Exon count:
1

NW_012133852.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012133852.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft Genome Sequence of the Basidiomycetous Yeast-Like Fungus Pseudozyma hubeiensis SY62, Which Produces an Abundant Amount of the Biosurfactant Mannosylerythritol Lipids. Konishi M, et al. Genome Announc, 2013 Jun 27. PMID 23814110, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into peroxisome matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_012133852.1 Reference assembly

    Range
    329008..332403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012338116.1 → XP_012193506.1  hypothetical protein PHSY_007522 [Pseudozyma hubeiensis SY62]

    See identical proteins and their annotated locations for XP_012193506.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R9PEX2
    Conserved Domains (4) summary
    COG0464
    Location:498 → 1002
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:812 → 941
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam09262
    Location:140 → 236
    PEX-1N; Peroxisome biogenesis factor 1, N-terminal
    cl21455
    Location:501 → 614
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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