U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Cldn23 claudin 23 [ Rattus norvegicus (Norway rat) ]

Gene ID: 290789, updated on 9-Dec-2024

Summary

Official Symbol
Cldn23provided by RGD
Official Full Name
claudin 23provided by RGD
Primary source
RGD:1309001
See related
EnsemblRapid:ENSRNOG00000011424 AllianceGenome:RGD:1309001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable structural molecule activity. Predicted to be involved in bicellular tight junction assembly and cell adhesion. Predicted to be active in bicellular tight junction and plasma membrane. Orthologous to human CLDN23 (claudin 23). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Cldn23 in Genome Data Viewer
Location:
16q12.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (63117045..63118769)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (56413677..56415401)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (59988603..59990327)

Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102552468 Neighboring gene uncharacterized LOC120097468 Neighboring gene uncharacterized LOC120097487 Neighboring gene LDL receptor related protein like 1 Neighboring gene Tu translation elongation factor, mitochondrial, pseudogene 1 Neighboring gene uncharacterized LOC120097469 Neighboring gene uncharacterized LOC134482392

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033062.1NP_001028234.1  claudin-23

    See identical proteins and their annotated locations for NP_001028234.1

    Status: PROVISIONAL

    Source sequence(s)
    BC100630
    UniProtKB/TrEMBL
    A6IVM1, F7F879, Q497B5
    Related
    ENSRNOP00000015175.3, ENSRNOT00000015176.6
    Conserved Domains (1) summary
    cl21598
    Location:5137
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086034.1 Reference GRCr8

    Range
    63117045..63118769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)