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Or5ar1 olfactory receptor family 5 subfamily AR member 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 295732, updated on 9-Dec-2024

Summary

Official Symbol
Or5ar1provided by RGD
Official Full Name
olfactory receptor family 5 subfamily AR member 1provided by RGD
Primary source
RGD:1333623
See related
EnsemblRapid:ENSRNOG00000079508 AllianceGenome:RGD:1333623
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Olr462
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
Orthologs
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Genomic context

See Or5ar1 in Genome Data Viewer
Location:
3q24
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (91314261..91315193, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (70907592..70908524, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (73225695..73226627, complement)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor pseudogene 460 Neighboring gene olfactory receptor family 2 subfamily AH member 1 Neighboring gene olfactory receptor family 5 subfamily AP member 2 Neighboring gene olfactory receptor family 5 subfamily AP member 2B

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables copper ion binding ISO
Inferred from Sequence Orthology
more info
 
enables odorant binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables odorant binding ISO
Inferred from Sequence Orthology
more info
 
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables olfactory receptor activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
olfactory receptor Olr462
Names
olfactory receptor 462
olfactory receptor gene Olr462

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001000295.1NP_001000295.1  olfactory receptor Olr462

    See identical proteins and their annotated locations for NP_001000295.1

    Status: REVIEWED

    Source sequence(s)
    JAXUCZ010000003
    UniProtKB/TrEMBL
    A6HMV0, D3ZD44
    Related
    ENSRNOP00000098921.1, ENSRNOT00000121273.1
    Conserved Domains (2) summary
    pfam00001
    Location:41290
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:31308
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    91314261..91315193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)