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9530082P21Rikl RIKEN cDNA 9530082P21 gene like [ Rattus norvegicus (Norway rat) ]

Gene ID: 360487, updated on 27-Nov-2024

Summary

Official Symbol
9530082P21Riklprovided by RGD
Official Full Name
RIKEN cDNA 9530082P21 gene likeprovided by RGD
Primary source
RGD:1561157
See related
EnsemblRapid:ENSRNOG00000042258 AllianceGenome:RGD:1561157
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1561157
Expression
Biased expression in Lung (RPKM 96.0), Spleen (RPKM 49.1) and 9 other tissues See more
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Genomic context

See 9530082P21Rikl in Genome Data Viewer
Location:
10q12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (13275611..13276535)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (12771023..12771947)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (13084304..13085228)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene protein kinase, membrane associated tyrosine/threonine 1 Neighboring gene progestin and adipoQ receptor family member 4 Neighboring gene kringle containing transmembrane protein 2 Neighboring gene FLYWCH-type zinc finger 1 Neighboring gene FLYWCH family member 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
uncharacterized protein LOC360487

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134569.1NP_001128041.1  uncharacterized protein LOC360487

    See identical proteins and their annotated locations for NP_001128041.1

    Status: PREDICTED

    Source sequence(s)
    CH473948
    UniProtKB/TrEMBL
    A6HCL9, D4A561
    Related
    ENSRNOP00000059381.1, ENSRNOT00000066310.3

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    13275611..13276535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)