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Vom1r27 vomeronasal 1 receptor 27 [ Rattus norvegicus (Norway rat) ]

Gene ID: 494297, updated on 9-Dec-2024

Summary

Symbol
Vom1r27provided by RGD
Full Name
vomeronasal 1 receptor 27provided by RGD
Primary source
RGD:1359724
See related
EnsemblRapid:ENSRNOG00000075592 AllianceGenome:RGD:1359724
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
V1re19
Summary
Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; response to pheromone; and sensory perception of chemical stimulus. Predicted to be located in plasma membrane. Orthologous to human VN1R2 (vomeronasal 1 receptor 2). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See Vom1r27 in Genome Data Viewer
Location:
1q12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (73604666..73605583)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (64689726..64690643)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (68528976..68529893)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor pseudogene 34 Neighboring gene vomeronasal 1 receptor pseudogene 35 Neighboring gene vomeronasal type-1 receptor 4-like Neighboring gene BUD23, rRNA methyltransferase and ribosome maturation factor, pseudogene 4

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables pheromone receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in response to pheromone IEA
Inferred from Electronic Annotation
more info
 
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
vomeronasal 1 receptor 27
Names
vomernasal 1 receptor Vom1r27
vomeronasal 1 receptor, E19
vomeronasal V1r-type receptor V1re19
vomeronasal type-1 receptor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008952.1NP_001008952.1  vomeronasal 1 receptor 27

    See identical proteins and their annotated locations for NP_001008952.1

    Status: VALIDATED

    UniProtKB/TrEMBL
    A0A8I5ZNX2, A0A8I6GIT5
    Related
    ENSRNOP00000109524.1, ENSRNOT00000137737.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    73604666..73605583
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)