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LOC646700 putative UPF0607 protein ENSP00000383783 pseudogene [ Homo sapiens (human) ]

Gene ID: 646700, updated on 10-Dec-2024

Summary

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Gene symbol
LOC646700
Gene description
putative UPF0607 protein ENSP00000383783 pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC646700 in Genome Data Viewer
Location:
9p21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (28147911..28149428)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (28158518..28160035)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (28147909..28149426)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376002 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:27679142-27679886 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:27683189-27684388 Neighboring gene uncharacterized LOC124902135 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_107363 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:27771740-27772389 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:27788871-27789372 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28255 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19823 Neighboring gene leucine rich repeat and Ig domain containing 2 Neighboring gene NANOG hESC enhancer GRCh37_chr9:28317701-28318202 Neighboring gene NANOG hESC enhancer GRCh37_chr9:28389345-28389846 Neighboring gene uncharacterized LOC105376004 Neighboring gene uncharacterized LOC124902136 Neighboring gene potassium channel tetramerization domain containing 10 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • UPF0607 protein ENSP00000381418-like pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021642.3 

    Range
    1..1518
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    28147911..28149428
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    28158518..28160035
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    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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