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Frmd1 FERM domain containing 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 689709, updated on 9-Dec-2024

Summary

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Official Symbol
Frmd1provided by RGD
Official Full Name
FERM domain containing 1provided by RGD
Primary source
RGD:1588779
See related
AllianceGenome:RGD:1588779
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human FRMD1 (FERM domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Biased expression in Lung (RPKM 7.0), Kidney (RPKM 6.9) and 3 other tissues See more
Orthologs
human all
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Genomic context

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See Frmd1 in Genome Data Viewer
Location:
1q12
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (63750852..63762383, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (55079285..55090230, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (54316651..54328405, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene sperm motility kinase Y-like Neighboring gene uncharacterized LOC134485083 Neighboring gene dishevelled-binding antagonist of beta-catenin 2 Neighboring gene SPARC related modular calcium binding 2 Neighboring gene transfer RNA proline (anticodon AGG) 46

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
FERM domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    63750852..63762383 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063280883.1 → XP_063136953.1  FERM domain-containing protein 1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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