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Rps4x-ps6 ribosomal protein S4, X-linked, pseudogene 6 [ Rattus norvegicus (Norway rat) ]

Gene ID: 691662, updated on 17-Aug-2024

Summary

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Official Symbol
Rps4x-ps6provided by RGD
Official Full Name
ribosomal protein S4, X-linked, pseudogene 6provided by RGD
Primary source
RGD:1597232
See related
AllianceGenome:RGD:1597232
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
This locus was determined to be a processed pseudogene of Rps4x (GeneID:100362640) since it has a similar nucleotide sequence to the coding region of the parental gene, but contains no intact open reading frame. Consistent with this locus being a processed pseudogene, it contains only exonic sequences relative to the parental gene. [provided by RefSeq, Apr 2015]
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Genomic context

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See Rps4x-ps6 in Genome Data Viewer
Location:
10q22
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (45751306..45752153, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (45251776..45252623, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (46814649..46815803, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene target of myb1 like 2 membrane trafficking protein Neighboring gene dynein regulatory complex subunit 3 Neighboring gene ATP synthase mitochondrial F1 complex assembly factor 2 Neighboring gene GID complex subunit 4 Neighboring gene developmentally regulated GTP binding protein 2 Neighboring gene myosin XVA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • ribosomal protein S4, X-linked pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042099.1 

    Range
    101..948
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    45751306..45752153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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