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    C1h15orf40-ps2 similar to human chromosome 15 open reading frame 40, pseudogene 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100363116, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C1h15orf40-ps2provided by RGD
    Official Full Name
    similar to human chromosome 15 open reading frame 40, pseudogene 2provided by RGD
    Primary source
    RGD:2324773
    See related
    AllianceGenome:RGD:2324773
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human C15orf40 (chromosome 15 open reading frame 40). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C1h15orf40-ps2 in Genome Data Viewer
    Location:
    6q32
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (136786988..136788580)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (130965834..130967426)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (136473683..136475156)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene kinesin light chain 1 Neighboring gene X-ray repair cross complementing 3 Neighboring gene zinc finger FYVE-type containing 21 Neighboring gene protein phosphatase 1, regulatory subunit 13B Neighboring gene atherin-like Neighboring gene uncharacterized LOC120103629 Neighboring gene uncharacterized LOC134479260 Neighboring gene uncharacterized LOC102548399

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • UPF0235 protein C15orf40 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_081627.1 

      Range
      101..1693
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      136786988..136788580
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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