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    Mup5 major urinary protein 5 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 298107, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mup5provided by RGD
    Official Full Name
    major urinary protein 5provided by RGD
    Primary source
    RGD:735107
    See related
    AllianceGenome:RGD:735107
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    PGCL6
    Summary
    Predicted to enable pheromone binding activity and small molecule binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 14142.4) See more
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    Genomic context

    See Mup5 in Genome Data Viewer
    Location:
    5q24
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (79996023..79999893, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (75201324..75204903, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (77744217..77903161, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene major urinary protein 4, pseudogene 8 Neighboring gene major urinary protein-like Neighboring gene zinc finger protein 37-like Neighboring gene major urinary protein-like

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables endopeptidase inhibitor activity NAS
    Non-traceable Author Statement
    more info
    PubMed 
    enables pheromone binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables small molecule binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    major urinary protein 5
    Names
    alpha-2u globulin PGCL5
    alpha-2u globulin PGCL6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_203325.2NP_976070.2  major urinary protein 5 precursor

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000005
      UniProtKB/TrEMBL
      A6KDY3, Q9JJI1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      79996023..79999893 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039109478.2XP_038965406.1  major urinary protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A8I6AJN1, Q9JJI1
      Conserved Domains (1) summary
      cd19428
      Location:69224
      lipocalin_MUP-like; major urinary proteins (MUPs) and similar proteins

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_147213.1: Suppressed sequence

      Description
      NM_147213.1: This RefSeq was removed because it is redundant with another RefSeq.