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    Cckbr cholecystokinin B receptor [ Rattus norvegicus (Norway rat) ]

    Gene ID: 25706, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cckbrprovided by RGD
    Official Full Name
    cholecystokinin B receptorprovided by RGD
    Primary source
    RGD:2290
    See related
    EnsemblRapid:ENSRNOG00000017679 AllianceGenome:RGD:2290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Cck2r; Cholrec
    Summary
    Cholecystokinin was one of the first gastrointestinal peptides discovered in the mammalian brain. Cholecystokinin receptors are members of the G protein-coupled receptor superfamily, stimulating phosphatidylinositol turnover and intracellular calcium mobilization. This gene encodes a cholecystokinin receptor of the B subtype. These receptors occur throughout the central nervous system where they modulate anxiety, analgesia, arousal, and neuroleptic activity. [provided by RefSeq, Jul 2008]
    Expression
    Restricted expression toward (RPKM 39.4) See more
    Orthologs
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    Genomic context

    See Cckbr in Genome Data Viewer
    Location:
    1q32
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (169183578..169193583)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (159771733..159781738)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (170262218..170272298)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene similar to human chromosome 11 open reading frame 42 Neighboring gene cyclic nucleotide gated channel subunit alpha 4 Neighboring gene FHF complex subunit HOOK interacting protein 1B Neighboring gene uncharacterized LOC108349007 Neighboring gene caveolae associated protein 3 Neighboring gene uncharacterized LOC134483765

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables cholecystokinin receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cholecystokinin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables cholecystokinin receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables gastrin receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables gastrin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables gastrin receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables gastrin receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables gastrin receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables neuropeptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables peptide hormone binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables peptide hormone binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables type B gastrin/cholecystokinin receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables type B gastrin/cholecystokinin receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in ERK1 and ERK2 cascade IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in behavioral defense response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cholecystokinin signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cholecystokinin signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in digestive tract development IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within digestive tract development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in estrous cycle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in gastric acid secretion IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within gastric acid secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in gland development IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within gland development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in histamine secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neuropeptide signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in pH reduction IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within pH reduction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of behavioral fear response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of cell population proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cell population proliferation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of cytosolic calcium ion concentration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cytosolic calcium ion concentration ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of somatostatin secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of synaptic transmission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of synaptic transmission, GABAergic IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of synaptic transmission, glutamatergic IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to insulin IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    gastrin/cholecystokinin type B receptor
    Names
    CCK-B receptor
    CCK-BR
    CCK2 receptor
    CCK2-R
    cholecystokinin-2 receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013165.3NP_037297.2  gastrin/cholecystokinin type B receptor

      Status: REVIEWED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/Swiss-Prot
      P30553
      UniProtKB/TrEMBL
      A6I7I2, G3V8A8
      Related
      ENSRNOP00000024077.1, ENSRNOT00000024077.5
      Conserved Domains (2) summary
      cd14964
      Location:5682
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:55406
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      169183578..169193583
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)