SPMIP1 sperm microtubule inner protein 1 [Homo sapiens (human)] - Gene

Summary

Official Symbol: SPMIP1provided by HGNC
Official Full Name: sperm microtubule inner protein 1provided by HGNC
Primary source: HGNC:HGNC:52392
See related: Ensembl:ENSG00000272899 AllianceGenome:HGNC:52392
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: ATP6V1FNB
Expression: Broad expression in kidney (RPKM 1.9), small intestine (RPKM 1.8) and 22 other tissues See more
Orthologs: mouse all
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Genomic context

Location:: 7q32.1

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	7	NC_000007.14 (128866330..128872047)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	7	NC_060931.1 (130179257..130184974)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	7	NC_000007.13 (128506384..128512101)

Chromosome 7 - NC_000007.14 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Tissue-specific circular RNA induction during human fetal development
Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
BioProject: PRJNA270632
Publication: PMID 26076956
Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

D12S1957 (e-PCR)
- UniSTS:64048

ATP6V1F (e-PCR)
- UniSTS:503672

STS-Z40812 (e-PCR)
- UniSTS:5515

SHGC-32431 (e-PCR)
- UniSTS:62150

ATP6V1F_3928 (e-PCR)
- UniSTS:462047

General protein information

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Preferred Names: protein SPMIP1

Names: ATP6V1F neighbor gene protein; protein ATP6V1FNB; sperm associated microtubule inner protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.