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    Stk32c serine/threonine kinase 32C [ Rattus norvegicus (Norway rat) ]

    Gene ID: 365381, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Stk32cprovided by RGD
    Official Full Name
    serine/threonine kinase 32Cprovided by RGD
    Primary source
    RGD:1305864
    See related
    EnsemblRapid:ENSRNOG00000006962 AllianceGenome:RGD:1305864
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction. Orthologous to human STK32C (serine/threonine kinase 32C). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 66.3), Adrenal (RPKM 3.8) and 1 other tissue See more
    Orthologs
    human mouse all
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    Genomic context

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    See Stk32c in Genome Data Viewer
    Location:
    1q41
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (203330325..203411325, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (193900718..193981723, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (211440335..211520699, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene janus kinase and microtubule interacting protein 3 Neighboring gene dihydropyrimidinase-like 4 Neighboring gene uncharacterized LOC120099954 Neighboring gene leucine rich repeat containing 27 Neighboring gene PWWP domain containing 2B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    serine/threonine-protein kinase 32C
    NP_001102392.1
    XP_038941287.1
    XP_063125744.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108922.1 → NP_001102392.1  serine/threonine-protein kinase 32C

      See identical proteins and their annotated locations for NP_001102392.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473953
      UniProtKB/TrEMBL
      A6HXA9, D4A3D9
      Related
      ENSRNOP00000009178.5, ENSRNOT00000009178.6
      Conserved Domains (1) summary
      cd05578
      Location:93 → 352
      STKc_Yank1; Catalytic domain of the Serine/Threonine Kinase, Yank1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      203330325..203411325 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039085359.2 → XP_038941287.1  serine/threonine-protein kinase 32C isoform X1

      UniProtKB/TrEMBL
      D4A3D9
      Conserved Domains (1) summary
      cd05578
      Location:13 → 272
      STKc_Yank1; Catalytic domain of the Serine/Threonine Kinase, Yank1

    2. XM_063269674.1 → XP_063125744.1  serine/threonine-protein kinase 32C isoform X2

      UniProtKB/TrEMBL
      D4A3D9
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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