U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    Pigm phosphatidylinositol glycan anchor biosynthesis, class M [ Rattus norvegicus (Norway rat) ]

    Gene ID: 79112, updated on 9-Dec-2024

    Summary

    Symbol
    Pigmprovided by RGD
    Full Name
    phosphatidylinositol glycan anchor biosynthesis, class Mprovided by RGD
    Primary source
    RGD:71041
    See related
    EnsemblRapid:ENSRNOG00000007735 AllianceGenome:RGD:71041
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    GPI-MT-I
    Summary
    Enables mannosyltransferase activity. Involved in GPI anchor biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of glycosylphosphatidylinositol-mannosyltransferase I complex. Orthologous to human PIGM (phosphatidylinositol glycan anchor biosynthesis class M). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Pigm in Genome Data Viewer
    Location:
    13q24
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (87370693..87374390)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (84838329..84842026)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (90759260..90762957)

    Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134481592 Neighboring gene potassium inwardly-rectifying channel, subfamily J, member 9 Neighboring gene potassium inwardly-rectifying channel, subfamily J, member 10 Neighboring gene uncharacterized LOC103692291 Neighboring gene uncharacterized LOC108352575

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane  
    part_of glycosylphosphatidylinositol-mannosyltransferase I complex  

    General protein information

    Preferred Names
    GPI mannosyltransferase 1
    Names
    GPI mannosyltransferase I
    PIG-M mRNA for mannosyltransferase
    phosphatidylinositol glycan, class M
    phosphatidylinositol-glycan biosynthesis class M protein
    NP_077058.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_024144.2NP_077058.1  GPI mannosyltransferase 1

      See identical proteins and their annotated locations for NP_077058.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000013
      UniProtKB/Swiss-Prot
      Q9EQY6
      UniProtKB/TrEMBL
      A6JG55
      Related
      ENSRNOP00000010551.3, ENSRNOT00000010551.5
      Conserved Domains (1) summary
      pfam05007
      Location:140408
      Mannosyl_trans; Mannosyltransferase (PIG-M)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086031.1 Reference GRCr8

      Range
      87370693..87374390
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    External link. Please review our privacy policy.