Rimoc1 RAB7A interacting MON1-CCZ1 complex subunit 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Rimoc1provided by RGD
Official Full Name: RAB7A interacting MON1-CCZ1 complex subunit 1provided by RGD
Primary source: RGD:1305938
See related: AllianceGenome:RGD:1305938
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1305938
Summary: Predicted to be involved in mitophagy. Predicted to be located in cytosol and nucleoplasm. Orthologous to human RIMOC1 (RAB7A interacting MON1-CCZ1 complex subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Kidney (RPKM 98.2), Brain (RPKM 93.0) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 2q16

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	2	NC_086020.1 (54917383..54931577, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	2	NC_051337.1 (53189787..53203981, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	2	NC_005101.4 (53813129..53827329, complement)

Chromosome 2 - NC_086020.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in mitophagy	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info
located_in cytosol	ISO Inferred from Sequence Orthology more info
located_in nucleoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleoplasm	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: RAB7A-interacting MON1-CCZ1 complex subunit 1

Names: UPF0600 protein C5orf51 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001395104.2 → NP_001382033.1 RAB7A-interacting MON1-CCZ1 complex subunit 1

Status: VALIDATED

Source sequence(s)

JAXUCZ010000002

UniProtKB/TrEMBL

A0A0G2JVL5, A0A8I5ZKP0

Conserved Domains (1) summary

pfam17716
Location:36 → 290

DUF5561; Family of unknown function (DUF5561)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086020.1 Reference GRCr8

Range

54917383..54931577 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_017590858.3 → XP_017446347.1 RAB7A-interacting MON1-CCZ1 complex subunit 1 isoform X1

Conserved Domains (1) summary

pfam17716
Location:36 → 241

DUF5561; Family of unknown function (DUF5561)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_001134548.1: Suppressed sequence

Description

NM_001134548.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.