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    Ly6g6f lymphocyte antigen 6 family member G6F [ Rattus norvegicus (Norway rat) ]

    Gene ID: 309609, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ly6g6fprovided by RGD
    Official Full Name
    lymphocyte antigen 6 family member G6Fprovided by RGD
    Primary source
    RGD:1303333
    See related
    EnsemblRapid:ENSRNOG00000027225 AllianceGenome:RGD:1303333
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    G6f
    Summary
    Predicted to be located in plasma membrane. Orthologous to human LY6G6F (lymphocyte antigen 6 family member G6F). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Spleen (RPKM 28.9) and Lung (RPKM 2.8) See more
    Orthologs
    NEW
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    Genomic context

    See Ly6g6f in Genome Data Viewer
    Location:
    20p12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (3742116..3746984)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (3737459..3742327)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (5071041..5076627, complement)

    Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 16A, phospholipase Neighboring gene ribosomal protein S25, pseudogene 2 Neighboring gene lymphocyte antigen 6 family member G6D Neighboring gene lymphocyte antigen 6 family member G6E Neighboring gene lymphocyte antigen 6 family member G6C

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    lymphocyte antigen 6 complex locus protein G6f
    Names
    lymphocyte antigen 6 complex, locus G6F

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003691.1NP_001003691.1  lymphocyte antigen 6 complex locus protein G6f precursor

      See identical proteins and their annotated locations for NP_001003691.1

      Status: VALIDATED

      Source sequence(s)
      BX883045
      UniProtKB/Swiss-Prot
      Q6MG56
      UniProtKB/TrEMBL
      A0A096MJA3
      Related
      ENSRNOP00000098100.1, ENSRNOT00000120418.2
      Conserved Domains (2) summary
      smart00410
      Location:23118
      IG_like; Immunoglobulin like
      cl11960
      Location:27128
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086038.1 Reference GRCr8

      Range
      3742116..3746984
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)