Vom1r88 vomeronasal 1 receptor 88 [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Vom1r88provided by RGD
Full Name: vomeronasal 1 receptor 88provided by RGD
Primary source: RGD:1549699
See related: EnsemblRapid:ENSRNOG00000080641 AllianceGenome:RGD:1549699
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: V1rc28
Summary: Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; response to pheromone; and sensory perception of chemical stimulus. Predicted to be located in plasma membrane. Orthologous to human VN1R5 (vomeronasal 1 receptor 5 (gene/pseudogene)). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

Location:: 4q24

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	4	NC_086022.1 (88677094..88677987)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	4	NC_051339.1 (87346933..87347826)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	4	NC_005103.4 (88417175..88424973)

Chromosome 4 - NC_086022.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables pheromone receptor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in G protein-coupled receptor signaling pathway	IEA Inferred from Electronic Annotation more info
involved_in response to pheromone	IEA Inferred from Electronic Annotation more info
involved_in sensory perception of chemical stimulus	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: vomeronasal 1 receptor 88

Names: vomernasal 1 receptor Vom1r88; vomeronasal 1 receptor, C28; vomeronasal V1r-type receptor V1rc28; vomeronasal type-1 receptor 90

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.