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    Or8s10 olfactory receptor family 8 subfamily S member 10 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 300202, updated on 9-Dec-2024

    Summary

    Official Symbol
    Or8s10provided by RGD
    Official Full Name
    olfactory receptor family 8 subfamily S member 10provided by RGD
    Primary source
    RGD:1333183
    See related
    EnsemblRapid:ENSRNOG00000071699 AllianceGenome:RGD:1333183
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Olr1107
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
    Expression
    Restricted expression toward (RPKM 8.8) See more
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    Genomic context

    See Or8s10 in Genome Data Viewer
    Location:
    7q36
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (131434491..131460236)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (129567612..129575031)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (140030438..140037848)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 8 subfamily S member 2 Neighboring gene similar to human chromosome 12 open reading frame 54 Neighboring gene U2 spliceosomal RNA Neighboring gene ribosomal protein S10, pseudogene 3 Neighboring gene olfactory receptor family 8 subfamily S member 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in detection of chemical stimulus involved in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    olfactory receptor Olr1107
    Names
    olfactory receptor 1107
    olfactory receptor gene Olr1107

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001000424.1NP_001000424.1  olfactory receptor Olr1107

      See identical proteins and their annotated locations for NP_001000424.1

      Status: REVIEWED

      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/TrEMBL
      F7F8N8, Q5USB9
      Related
      ENSRNOP00000105949.1, ENSRNOT00000138350.1
      Conserved Domains (1) summary
      cl21561
      Location:31303
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      131434491..131460236
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039078920.2XP_038934848.2  olfactory receptor Olr1107 isoform X2

    2. XM_006242320.5XP_006242382.1  olfactory receptor Olr1107 isoform X1

      See identical proteins and their annotated locations for XP_006242382.1

      UniProtKB/TrEMBL
      F7F8N8, Q5USB9
      Conserved Domains (1) summary
      cl21561
      Location:31303
      7tm_4; Olfactory receptor
    3. XM_063263373.1XP_063119443.1  olfactory receptor Olr1107 isoform X2