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    Tmem202 transmembrane protein 202 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 691306, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem202provided by RGD
    Official Full Name
    transmembrane protein 202provided by RGD
    Primary source
    RGD:1585107
    See related
    EnsemblRapid:ENSRNOG00000026112 AllianceGenome:RGD:1585107
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be active in plasma membrane. Orthologous to human TMEM202 (transmembrane protein 202). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 23.3), Adrenal (RPKM 6.4) and 6 other tissues See more
    Orthologs
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    Genomic context

    See Tmem202 in Genome Data Viewer
    Location:
    8q24
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (68806629..68832638, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (59910824..59919342, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (64299646..64305330, complement)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene ariadne RBR E3 ubiquitin protein ligase 1 Neighboring gene cyclin-dependent kinases regulatory subunit 2-like Neighboring gene small nucleolar RNA SNORA40 Neighboring gene hexosaminidase subunit alpha Neighboring gene CUGBP, Elav-like family member 6 Neighboring gene poly (ADP-ribose) polymerase family, member 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109636.2NP_001103106.1  transmembrane protein 202

      See identical proteins and their annotated locations for NP_001103106.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/TrEMBL
      A6J524, D3ZRF8
      Related
      ENSRNOP00000037213.4, ENSRNOT00000030199.6

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      68806629..68832638 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063266184.1XP_063122254.1  transmembrane protein 202 isoform X1

    2. XM_063266182.1XP_063122252.1  transmembrane protein 202 isoform X1

    3. XM_063266183.1XP_063122253.1  transmembrane protein 202 isoform X1

    4. XM_063266185.1XP_063122255.1  transmembrane protein 202 isoform X1