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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086027.1 Reference GRCr8
- Range
-
74057488..74151610
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006245076.5 → XP_006245138.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X4
See identical proteins and their annotated locations for XP_006245138.1
- UniProtKB/TrEMBL
- A0A8I5ZL06, D3ZYT8
- Conserved Domains (4) summary
-
- cd03334
Location:629 → 889
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1829 → 2095
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
-
XM_063267219.1 → XP_063123289.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X5
- UniProtKB/TrEMBL
-
A0A8I5ZL06
-
XM_063267220.1 → XP_063123290.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X7
- UniProtKB/TrEMBL
-
A0A8I5ZL06
-
XM_063267222.1 → XP_063123292.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X10
- UniProtKB/TrEMBL
-
A6IPK0
-
XM_006245077.5 → XP_006245139.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X4
See identical proteins and their annotated locations for XP_006245139.1
- UniProtKB/TrEMBL
- A0A8I5ZL06, D3ZYT8
- Conserved Domains (4) summary
-
- cd03334
Location:629 → 889
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1829 → 2095
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
-
XM_006245074.5 → XP_006245136.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X4
See identical proteins and their annotated locations for XP_006245136.1
- UniProtKB/TrEMBL
- A0A8I5ZL06, D3ZYT8
- Related
- ENSRNOP00000020447.6, ENSRNOT00000020447.10
- Conserved Domains (4) summary
-
- cd03334
Location:629 → 889
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1829 → 2095
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
-
XM_039084595.2 → XP_038940523.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X4
- UniProtKB/TrEMBL
- A0A8I5ZL06, D3ZYT8
- Conserved Domains (4) summary
-
- cd03334
Location:629 → 889
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1829 → 2095
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
-
XM_006245071.3 → XP_006245133.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1
See identical proteins and their annotated locations for XP_006245133.1
- UniProtKB/TrEMBL
- A0A8I5YBG1, A0A8I5ZL06
- Related
- ENSRNOP00000076715.1, ENSRNOT00000117606.2
- Conserved Domains (5) summary
-
- cd00139
Location:1803 → 2116
- PIPKc; Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II ...
- cd03334
Location:649 → 909
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:389 → 470
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:186 → 247
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cl12013
Location:1430 → 1477
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_039084596.2 → XP_038940524.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X6
- UniProtKB/TrEMBL
-
A0A8I5ZL06
- Conserved Domains (4) summary
-
- cd03334
Location:649 → 909
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:389 → 470
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:186 → 247
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1821 → 2087
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
-
XM_006245072.3 → XP_006245134.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X2
See identical proteins and their annotated locations for XP_006245134.1
- UniProtKB/TrEMBL
-
A0A8I5ZL06
- Conserved Domains (5) summary
-
- cd00139
Location:1802 → 2115
- PIPKc; Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II ...
- cd03334
Location:648 → 908
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:388 → 469
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:185 → 246
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cl12013
Location:1429 → 1476
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_006245079.3 → XP_006245141.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X8
See identical proteins and their annotated locations for XP_006245141.1
- UniProtKB/TrEMBL
-
A6IPK0
- Related
- ENSRNOP00000088892.2, ENSRNOT00000100337.2
- Conserved Domains (5) summary
-
- cd00139
Location:1746 → 2059
- PIPKc; Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II ...
- cd03334
Location:592 → 852
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:388 → 469
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:185 → 246
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cl12013
Location:1373 → 1420
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_006245073.3 → XP_006245135.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X3
See identical proteins and their annotated locations for XP_006245135.1
- UniProtKB/TrEMBL
-
A0A8I5ZL06
- Related
- ENSRNOP00000099448.1, ENSRNOT00000163654.1
- Conserved Domains (5) summary
-
- cd00139
Location:1791 → 2104
- PIPKc; Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II ...
- cd03334
Location:637 → 897
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:377 → 458
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:174 → 235
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cl12013
Location:1418 → 1465
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_063267221.1 → XP_063123291.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X9
- UniProtKB/TrEMBL
- A0A8I6AAS9, A6IPK0
-
XM_063267223.1 → XP_063123293.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X11
-
XM_063267224.1 → XP_063123294.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X13
-
XM_063267225.1 → XP_063123295.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X14
-
XM_039084597.2 → XP_038940525.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X12
- Conserved Domains (2) summary
-
- cd17300
Location:1032 → 1298
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
- cl02777
Location:1 → 92
- chaperonin_like; chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I ...