U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Rtp1 receptor (chemosensory) transporter protein 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 288006, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rtp1provided by RGD
    Official Full Name
    receptor (chemosensory) transporter protein 1provided by RGD
    Primary source
    RGD:1560980
    See related
    EnsemblRapid:ENSRNOG00000021992 AllianceGenome:RGD:1560980
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1560980
    Summary
    Predicted to enable olfactory receptor binding activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of bitter taste; protein insertion into membrane; and protein targeting to membrane. Predicted to be active in cell surface. Orthologous to human RTP1 (receptor transporter protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Rtp1 in Genome Data Viewer
    Location:
    11q23
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (90927633..90930149, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (77422982..77425498, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (80823989..80826505, complement)

    Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134481100 Neighboring gene receptor (chemosensory) transporter protein 4 Neighboring gene MBL associated serine protease 1 Neighboring gene uncharacterized LOC134481025 Neighboring gene uncharacterized LOC134481026 Neighboring gene adenosylhomocysteinase, pseudogene 11

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables olfactory receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in detection of chemical stimulus involved in sensory perception of bitter taste IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein insertion into membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein insertion into membrane ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein targeting to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cell surface IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    receptor-transporting protein 1
    Names
    receptor transporter protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105870.1NP_001099340.1  receptor-transporting protein 1

      See identical proteins and their annotated locations for NP_001099340.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473999
      UniProtKB/TrEMBL
      A6JS19, D4AEN1
      Related
      ENSRNOP00000029915.3, ENSRNOT00000032383.5
      Conserved Domains (1) summary
      pfam13695
      Location:87197
      zf-3CxxC; Zinc-binding domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086029.1 Reference GRCr8

      Range
      90927633..90930149 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)