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    Tmem151b transmembrane protein 151B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 301253, updated on 27-Dec-2024

    Summary

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    Official Symbol
    Tmem151bprovided by RGD
    Official Full Name
    transmembrane protein 151Bprovided by RGD
    Primary source
    RGD:1562074
    See related
    EnsemblRapid:ENSRNOG00000019961 AllianceGenome:RGD:1562074
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1562074
    Summary
    Orthologous to human TMEM151B (transmembrane protein 151B). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 97.6), Spleen (RPKM 11.9) and 3 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Tmem151b in Genome Data Viewer
    Location:
    9q12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (22953881..22961726)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (15456446..15464289)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (17841410..17846535)

    Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member B2 Neighboring gene NFKB inhibitor epsilon Neighboring gene t-complex-associated testis expressed 1 Neighboring gene uncharacterized LOC108351892 Neighboring gene alanyl-tRNA synthetase 2, mitochondrial Neighboring gene spermatogenesis associated, serine-rich 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    transmembrane protein 151B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191804.2 → NP_001178733.1  transmembrane protein 151B

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000009
      UniProtKB/TrEMBL
      A6JIZ7, D3ZQW5
      Related
      ENSRNOP00000027031.4, ENSRNOT00000027031.7
      Conserved Domains (1) summary
      pfam14857
      Location:40 → 486
      TMEM151; TMEM151 family

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086027.1 Reference GRCr8

      Range
      22953881..22961726
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008766851.4 → XP_008765073.3  transmembrane protein 151B isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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