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    RGD1563302 RGD1563302 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 361049, updated on 27-Nov-2024

    Summary

    Official Symbol
    RGD1563302provided by RGD
    Official Full Name
    RGD1563302provided by RGD
    Primary source
    RGD:1563302
    See related
    EnsemblRapid:ENSRNOG00000038917 AllianceGenome:RGD:1563302
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Restricted expression toward (RPKM 423.9) See more
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    Genomic context

    See RGD1563302 in Genome Data Viewer
    Location:
    15p12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (37409708..37418463, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (33294197..33302939, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (39597084..39606027, complement)

    Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700129C05 gene like Neighboring gene uncharacterized LOC102551924 Neighboring gene ribosomal protein L7, pseudogene 31 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC120096998 Neighboring gene RCC1 and BTB domain containing protein 1 Neighboring gene ribosomal protein L6, pseudogene 5 Neighboring gene PHD finger protein 11B

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    uncharacterized protein LOC361049

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001162899.2NP_001156371.1  uncharacterized protein LOC361049

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000015
      UniProtKB/TrEMBL
      A0A8I6ATG3
      Related
      ENSRNOP00000056247.4, ENSRNOT00000059490.4

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086033.1 Reference GRCr8

      Range
      37409708..37418463 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006252122.5XP_006252184.1  uncharacterized protein LOC361049 isoform X1

      UniProtKB/TrEMBL
      A0A8I6ATG3, D3ZX89