Acbd7 acyl-CoA binding domain containing 7 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Acbd7provided by RGD
Official Full Name: acyl-CoA binding domain containing 7provided by RGD
Primary source: RGD:1564164
See related: EnsemblRapid:ENSRNOG00000071468 AllianceGenome:RGD:1564164
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1564164
Summary: Predicted to enable fatty-acyl-CoA binding activity. Predicted to be involved in fatty acid metabolic process. Orthologous to human ACBD7 (acyl-CoA binding domain containing 7). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Testes (RPKM 2.6), Brain (RPKM 2.1) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 17q12.3

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	17	NC_086035.1 (79813106..79821254, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	17	NC_051352.1 (74903936..74909977, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	17	NC_005116.4 (78904549..78913372, complement)

Chromosome 17 - NC_086035.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within energy homeostasis	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within gene expression	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within leptin-mediated signaling pathway	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within response to food	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: acyl-CoA-binding domain-containing protein 7

Names: acyl-Coenzyme A binding domain containing 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001126079.1 → NP_001119551.1 acyl-CoA-binding domain-containing protein 7

See identical proteins and their annotated locations for NP_001119551.1

Status: PROVISIONAL

Source sequence(s)

CH473990

UniProtKB/TrEMBL

A6JM23

Related

ENSRNOP00000108701.1, ENSRNOT00000170659.1

Conserved Domains (1) summary

cl00221
Location:3 → 88

ACBP; Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity. Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a ...

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086035.1 Reference GRCr8

Range

79813106..79821254 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_006254269.5 → XP_006254331.1 acyl-CoA-binding domain-containing protein 7 isoform X1

UniProtKB/TrEMBL

D3ZB36

Conserved Domains (1) summary

cl00221
Location:3 → 87

ACBP; Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity. Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a ...