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    Mpo myeloperoxidase [ Rattus norvegicus (Norway rat) ]

    Gene ID: 303413, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mpoprovided by RGD
    Official Full Name
    myeloperoxidaseprovided by RGD
    Primary source
    RGD:1592081
    See related
    EnsemblRapid:ENSRNOG00000008310 AllianceGenome:RGD:1592081
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Enables peroxidase activity. Involved in several processes, including response to food; response to gold nanoparticle; and response to lipopolysaccharide. Located in extracellular space. Used to study acute kidney failure. Biomarker of chronic obstructive pulmonary disease; cystitis; and renovascular hypertension. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease 1; cystic fibrosis; kidney failure (multiple); liver disease (multiple); and lung disease (multiple). Orthologous to human MPO (myeloperoxidase). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Spleen (RPKM 105.3), Thymus (RPKM 100.8) and 4 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mpo in Genome Data Viewer
    Location:
    10q26
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (73092124..73102057)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (72594883..72608862)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (75087892..75098260)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480847 Neighboring gene SPT4 homolog, DSIF elongation factor subunit Neighboring gene TSPO associated protein 1 Neighboring gene microRNA 142 Neighboring gene lactoperoxidase Neighboring gene MKS transition zone complex subunit 1 Neighboring gene eosinophil peroxidase

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables heparin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables peroxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables peroxidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables peroxidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    NOT acts_upstream_of_or_within defense response to Gram-positive bacterium ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in defense response to bacterium IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within defense response to fungus ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within hydrogen peroxide catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in hydrogen peroxide catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within hypochlorous acid biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in low-density lipoprotein particle remodeling ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within removal of superoxide radicals ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within respiratory burst involved in defense response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to food IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to gold nanoparticle IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to lipopolysaccharide IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to mechanical stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to oxidative stress IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within response to yeast ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in azurophil granule ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in secretory granule ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    myeloperoxidase
    NP_001388741.1
    XP_006247157.1
    XP_006247158.1
    XP_063125167.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001401812.1NP_001388741.1  myeloperoxidase precursor

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010
      UniProtKB/TrEMBL
      A0A0G2K1A2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      73092124..73102057
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006247096.5XP_006247158.1  myeloperoxidase isoform X1

      See identical proteins and their annotated locations for XP_006247158.1

      UniProtKB/TrEMBL
      A0A0G2K1A2
      Related
      ENSRNOP00000071759.2, ENSRNOT00000081951.3
      Conserved Domains (1) summary
      cd09824
      Location:289702
      myeloperoxidase_like; Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases
    2. XM_006247095.4XP_006247157.1  myeloperoxidase isoform X1

      See identical proteins and their annotated locations for XP_006247157.1

      UniProtKB/TrEMBL
      A0A0G2K1A2
      Conserved Domains (1) summary
      cd09824
      Location:289702
      myeloperoxidase_like; Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases
    3. XM_063269097.1XP_063125167.1  myeloperoxidase isoform X1

      UniProtKB/TrEMBL
      A0A0G2K1A2

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001107036.1: Suppressed sequence

      Description
      NM_001107036.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.