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    Abhd16b abhydrolase domain containing 16B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 311720, updated on 14-Dec-2024

    Summary

    Official Symbol
    Abhd16bprovided by RGD
    Official Full Name
    abhydrolase domain containing 16Bprovided by RGD
    Primary source
    RGD:1309726
    See related
    EnsemblRapid:ENSRNOG00000015067 AllianceGenome:RGD:1309726
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1309726
    Summary
    Predicted to enable monoacylglycerol lipase activity and phospholipase activity. Predicted to be involved in monoacylglycerol catabolic process and phosphatidylserine catabolic process. Predicted to be located in nucleoplasm. Orthologous to human ABHD16B (abhydrolase domain containing 16B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Abhd16b in Genome Data Viewer
    Location:
    3q43
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (188972198..188974095)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (168594677..168596574)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (176985900..176987797)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 46 Neighboring gene RNA, U6 small nuclear 663 Neighboring gene uncharacterized LOC120101834 Neighboring gene uncharacterized LOC102548047 Neighboring gene TPD52 like 2 Neighboring gene ribosomal protein L34-like2 Neighboring gene DnaJ heat shock protein family (Hsp40) member C5

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables monoacylglycerol lipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phospholipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in monoacylglycerol catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in phosphatidylserine catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    ABHD16B
    Names
    abhydrolase domain-containing protein 16B
    alpha/beta hydrolase domain-containing protein 16B
    protein ABHD16B
    NP_001014074.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014052.2NP_001014074.1  ABHD16B

      See identical proteins and their annotated locations for NP_001014074.1

      Status: PROVISIONAL

      Source sequence(s)
      BC083664
      UniProtKB/Swiss-Prot
      Q5XIL6
      UniProtKB/TrEMBL
      A6KM09
      Related
      ENSRNOP00000020210.4, ENSRNOT00000020210.7
      Conserved Domains (1) summary
      pfam12695
      Location:167285
      Abhydrolase_5; Alpha/beta hydrolase family

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      188972198..188974095
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)