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    P2rx1 purinergic receptor P2X 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 25505, updated on 9-Dec-2024

    Summary

    Official Symbol
    P2rx1provided by RGD
    Official Full Name
    purinergic receptor P2X 1provided by RGD
    Primary source
    RGD:3240
    See related
    EnsemblRapid:ENSRNOG00000017606 AllianceGenome:RGD:3240
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    P2XMR
    Summary
    Enables anion binding activity; extracellularly ATP-gated monoatomic cation channel activity; and identical protein binding activity. Involved in several processes, including neuronal action potential; positive regulation of calcium ion import across plasma membrane; and regulation of presynaptic cytosolic calcium ion concentration. Part of protein-containing complex. Is active in glutamatergic synapse; postsynaptic membrane; and presynaptic active zone membrane. Orthologous to human P2RX1 (purinergic receptor P2X 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Lung (RPKM 76.9), Spleen (RPKM 54.0) and 8 other tissues See more
    Orthologs
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    Try the new Transcript table

    Genomic context

    See P2rx1 in Genome Data Viewer
    Location:
    10q24
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (58117107..58132167)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (57618586..57633648)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (59566268..59581328)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene zinc finger ZZ-type and EF-hand domain containing 1 Neighboring gene transfer RNA proline (anticodon GGG) 6 Neighboring gene ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 Neighboring gene calcium/calmodulin-dependent protein kinase kinase 1 Neighboring gene nuclear cap binding subunit 3

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables ATP binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables extracellularly ATP-gated monoatomic cation channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables extracellularly ATP-gated monoatomic cation channel activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables extracellularly ATP-gated monoatomic cation channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables extracellularly ATP-gated monoatomic cation channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables ligand-gated calcium channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables monoatomic cation channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables nucleotide binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables organic cyclic compound binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein-containing complex binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables purinergic nucleotide receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables purinergic nucleotide receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables suramin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in calcium ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in calcium-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within ceramide biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of establishment of localization in cell ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within establishment of localization in cell ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in excitatory postsynaptic potential IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within insemination ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in monoatomic cation transmembrane transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in monoatomic cation transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in monoatomic ion transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of monoatomic ion transport ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within monoatomic ion transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in neuronal action potential IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within platelet activation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of calcium ion import across plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of monoatomic ion transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in purinergic nucleotide receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of blood pressure IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within regulation of calcium ion transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of presynaptic cytosolic calcium ion concentration EXP
    Inferred from Experiment
    more info
    PubMed 
    involved_in regulation of presynaptic cytosolic calcium ion concentration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of presynaptic cytosolic calcium ion concentration IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within regulation of smooth muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of synaptic vesicle exocytosis EXP
    Inferred from Experiment
    more info
    PubMed 
    involved_in regulation of synaptic vesicle exocytosis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of synaptic vesicle exocytosis IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within regulation of vascular associated smooth muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of vasoconstriction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to ATP IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within response to ATP ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within serotonin secretion by platelet ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in synaptic transmission, glutamatergic IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in glutamatergic synapse EXP
    Inferred from Experiment
    more info
    PubMed 
    is_active_in glutamatergic synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane raft ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in postsynapse IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in postsynaptic membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in presynaptic active zone membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of protein-containing complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    P2X purinoceptor 1
    Names
    ATP receptor
    P2X1
    RP-2 protein
    purinergic receptor P2X, ligand-gated ion channel, 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001142367.2NP_001135839.1  P2X purinoceptor 1 isoform 2

      See identical proteins and their annotated locations for NP_001135839.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) has an alternate splice junction in the coding region, compared to variant 1. The resulting isoform (2) lacks an internal segment, compared to isoform 1.
      Source sequence(s)
      BC061742, X80477
      UniProtKB/TrEMBL
      A0A8I5Y0C5, B7U2F3
      Conserved Domains (1) summary
      cl02993
      Location:1341
      P2X_receptor; ATP P2X receptor
    2. NM_001285415.1NP_001272344.1  P2X purinoceptor 1 isoform 3

      See identical proteins and their annotated locations for NP_001272344.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) lacks an in-frame coding exon, compared to variant 1. The resulting isoform (3) lacks an internal segment, compared to isoform 1.
      Source sequence(s)
      BC061742, X80477
      UniProtKB/TrEMBL
      A0A0G2K5F9, A0A8I5Y0C5, A6HGH4, Q9JIF8
      Related
      ENSRNOP00000073411.1, ENSRNOT00000088245.3
      Conserved Domains (1) summary
      cl02993
      Location:1341
      P2X_receptor; ATP P2X receptor
    3. NM_012997.3NP_037129.1  P2X purinoceptor 1 isoform 1

      See identical proteins and their annotated locations for NP_037129.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longest isoform (1).
      Source sequence(s)
      BC061742, X80477
      UniProtKB/Swiss-Prot
      P47824
      UniProtKB/TrEMBL
      A0A8I5Y0C5, A6HGH3
      Related
      ENSRNOP00000024068.4, ENSRNOT00000024068.8
      Conserved Domains (1) summary
      TIGR00863
      Location:1368
      P2X; cation transporter protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      58117107..58132167
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039085284.2XP_038941212.1  P2X purinoceptor 1 isoform X1

      Conserved Domains (1) summary
      cl02993
      Location:1266
      P2X_receptor; ATP P2X receptor