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    Pgr15l G protein-coupled receptor 15-like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 296867, updated on 9-Dec-2024

    Summary

    Official Symbol
    Pgr15lprovided by RGD
    Official Full Name
    G protein-coupled receptor 15-likeprovided by RGD
    Primary source
    RGD:1562685
    See related
    EnsemblRapid:ENSRNOG00000021547 AllianceGenome:RGD:1562685
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1562685
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in non-motile cilium. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 4.4) See more
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    Genomic context

    See Pgr15l in Genome Data Viewer
    Location:
    Xq22
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (65994870..66000382)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (61983518..61989030)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (66314416..66319928)

    Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene hephaestin Neighboring gene 60 kDa heat shock protein, mitochondrial pseudogene Neighboring gene G protein-coupled receptor 165 Neighboring gene uncharacterized LOC134484004 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene ribosomal protein L34-like1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neuropeptide Y receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in non-motile cilium IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    G protein-coupled receptor 15-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106583.1NP_001100053.1  G protein-coupled receptor 15-like

      See identical proteins and their annotated locations for NP_001100053.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473966
      UniProtKB/TrEMBL
      A6IQ49, D3ZQ49
      Related
      ENSRNOP00000034633.3, ENSRNOT00000035405.6
      Conserved Domains (2) summary
      pfam00001
      Location:89346
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:83360
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086039.1 Reference GRCr8

      Range
      65994870..66000382
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)