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    Cldn23 claudin 23 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 290789, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cldn23provided by RGD
    Official Full Name
    claudin 23provided by RGD
    Primary source
    RGD:1309001
    See related
    EnsemblRapid:ENSRNOG00000011424 AllianceGenome:RGD:1309001
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable structural molecule activity. Predicted to be involved in bicellular tight junction assembly and cell adhesion. Predicted to be active in bicellular tight junction and plasma membrane. Orthologous to human CLDN23 (claudin 23). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Cldn23 in Genome Data Viewer
    Location:
    16q12.2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (63117045..63118769)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (56413677..56415401)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (59988603..59990327)

    Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102552468 Neighboring gene uncharacterized LOC120097468 Neighboring gene uncharacterized LOC120097487 Neighboring gene LDL receptor related protein like 1 Neighboring gene Tu translation elongation factor, mitochondrial, pseudogene 1 Neighboring gene uncharacterized LOC120097469 Neighboring gene uncharacterized LOC134482392

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033062.1NP_001028234.1  claudin-23

      See identical proteins and their annotated locations for NP_001028234.1

      Status: PROVISIONAL

      Source sequence(s)
      BC100630
      UniProtKB/TrEMBL
      A6IVM1, F7F879, Q497B5
      Related
      ENSRNOP00000015175.3, ENSRNOT00000015176.6
      Conserved Domains (1) summary
      cl21598
      Location:5137
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086034.1 Reference GRCr8

      Range
      63117045..63118769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)