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    Vom1r89 vomeronasal 1 receptor 89 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 494276, updated on 9-Dec-2024

    Summary

    Symbol
    Vom1r89provided by RGD
    Full Name
    vomeronasal 1 receptor 89provided by RGD
    Primary source
    RGD:1359215
    See related
    EnsemblRapid:ENSRNOG00000074119 AllianceGenome:RGD:1359215
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    V1rc15
    Summary
    Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; response to pheromone; and sensory perception of chemical stimulus. Predicted to be located in plasma membrane. Orthologous to human VN1R5 (vomeronasal 1 receptor 5 (gene/pseudogene)). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Vom1r89 in Genome Data Viewer
    Location:
    4q31
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (97271649..97273299, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (95942626..95943550, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (97566927..97567844, complement)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene high-mobility group box 1, pseudogene 19 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene mitotic arrest deficient 2 like 1 Neighboring gene G protein subunit gamma 12 Neighboring gene uncharacterized LOC100912188 Neighboring gene growth arrest and DNA-damage-inducible, alpha

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables pheromone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to pheromone IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    putative vomeronasal receptor-like protein 4; vomeronasal 1 receptor 89
    Names
    vomernasal 1 receptor Vom1r89
    vomeronasal 1 receptor, C15
    vomeronasal V1r-type receptor V1rc15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      97271649..97273299 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039108524.2XP_038964452.1  putative vomeronasal receptor-like protein 4

      UniProtKB/TrEMBL
      A0A8I6AB40
      Related
      ENSRNOP00000089802.1, ENSRNOT00000113064.2
      Conserved Domains (2) summary
      cd14964
      Location:527
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:5294
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001008928.1: Suppressed sequence

      Description
      NM_001008928.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.