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    Pnma8a PNMA family member 8A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 361515, updated on 9-Dec-2024

    Summary

    Official Symbol
    Pnma8aprovided by RGD
    Official Full Name
    PNMA family member 8Aprovided by RGD
    Primary source
    RGD:1310803
    See related
    AllianceGenome:RGD:1310803
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Pnmal1; RGD1310803
    Summary
    Orthologous to human PNMA8A (PNMA family member 8A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 98.5) See more
    Orthologs
    NEW
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    Genomic context

    See Pnma8a in Genome Data Viewer
    Location:
    1q21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (86763475..86771117)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (77629272..77643156)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (78883239..78896551)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene PNMA family member 8B Neighboring gene 60S ribosomal protein L32 pseudogene Neighboring gene ribosomal protein L28, pseudogene 12 Neighboring gene uncharacterized LOC120099771

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    paraneoplastic antigen-like protein 8A
    Names
    PNMA-like 1
    PNMA-like protein 1
    paraneoplastic Ma antigen family member 8A
    paraneoplastic Ma antigen family-like 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108473.1NP_001101943.1  paraneoplastic antigen-like protein 8A

      See identical proteins and their annotated locations for NP_001101943.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473979
      UniProtKB/TrEMBL
      A6J8E6, A6J8E7, D3ZA53
      Conserved Domains (1) summary
      pfam14893
      Location:5357
      PNMA

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      86763475..86771117
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039081713.2XP_038937641.1  paraneoplastic antigen-like protein 8A isoform X1

      UniProtKB/TrEMBL
      A6J8E6, A6J8E7, D3ZA53
      Conserved Domains (1) summary
      pfam14893
      Location:5357
      PNMA
    2. XM_039081710.2XP_038937638.1  paraneoplastic antigen-like protein 8A isoform X1

      UniProtKB/TrEMBL
      A6J8E6, A6J8E7, D3ZA53
      Conserved Domains (1) summary
      pfam14893
      Location:5357
      PNMA
    3. XM_039081706.2XP_038937634.1  paraneoplastic antigen-like protein 8A isoform X1

      UniProtKB/TrEMBL
      A6J8E6, A6J8E7, D3ZA53
      Conserved Domains (1) summary
      pfam14893
      Location:5357
      PNMA