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    Cimap2 ciliary microtubule associated protein 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 500516, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cimap2provided by RGD
    Official Full Name
    ciliary microtubule associated protein 2provided by RGD
    Primary source
    RGD:1559493
    See related
    EnsemblRapid:ENSRNOG00000030914 AllianceGenome:RGD:1559493
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Lexm; RGD1559493
    Summary
    Predicted to enable mitochondrial ribosome binding activity. Predicted to act upstream of or within positive regulation of cell population proliferation and positive regulation of oxidative phosphorylation. Predicted to be located in mitochondrion. Orthologous to human CIMAP2 (ciliary microtubule associated protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 68.8) See more
    Orthologs
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    Genomic context

    See Cimap2 in Genome Data Viewer
    Location:
    5q34
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (126604814..126630692, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (121375998..121401869, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (126196071..126221916, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 61 Neighboring gene 24-dehydrocholesterol reductase Neighboring gene uncharacterized LOC120102943 Neighboring gene uncharacterized LOC120102944 Neighboring gene tetratricopeptide repeat domain 22 Neighboring gene prolyl-tRNA synthetase 2, mitochondrial

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    ciliary microtubule-associated protein 2
    Names
    lymphocyte expansion molecule
    uncharacterized protein C1orf177 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109262.2NP_001102732.1  ciliary microtubule-associated protein 2

      See identical proteins and their annotated locations for NP_001102732.1

      Status: VALIDATED

      Source sequence(s)
      BC160900, BQ209190, CN542282
      UniProtKB/Swiss-Prot
      B1H283
      Related
      ENSRNOP00000047785.3, ENSRNOT00000052130.6

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      126604814..126630692 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039110581.2XP_038966509.1  ciliary microtubule-associated protein 2 isoform X1