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    Ptger3 prostaglandin E receptor 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 24929, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ptger3provided by RGD
    Official Full Name
    prostaglandin E receptor 3provided by RGD
    Primary source
    RGD:3435
    See related
    EnsemblRapid:ENSRNOG00000010325 AllianceGenome:RGD:3435
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    EP3; EP3R; Rep3; rEP3a; rEP3b
    Summary
    Enables prostaglandin E receptor activity. Involved in several processes, including negative regulation of G protein-coupled receptor signaling pathway; regulation of circadian sleep/wake cycle; and regulation of secretion. Located in several cellular components, including brush border membrane; nuclear membrane; and proximal neuron projection. Used to study asthma and withdrawal disorder. Biomarker of colon cancer; membranous glomerulonephritis; and renovascular hypertension. Orthologous to human PTGER3 (prostaglandin E receptor 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 133.9), Uterus (RPKM 64.0) and 7 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Ptger3 in Genome Data Viewer
    Location:
    2q45
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (249264985..249409966)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (246606131..246750970)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (263895093..263979682)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene neuronal growth regulator 1 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene zinc finger RANBP2-type containing 2 Neighboring gene voltage-dependent anion channel 3, pseudogene 1 Neighboring gene microRNA 186 Neighboring gene heterogeneous nuclear ribonucleoprotein A1, pseudogene 38 Neighboring gene Set nuclear proto-oncogene, pseudogene 12

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables prostaglandin E receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables prostaglandin E receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables prostaglandin E receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables prostaglandin E receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables prostaglandin E receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within adenylate cyclase-modulating G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within bicarbonate transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cAMP biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cAMP/PKA signal transduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cellular response to forskolin IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cellular response to interleukin-1 IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in cellular response to lipopolysaccharide IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in cellular response to prostaglandin E stimulus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in desensitization of G protein-coupled receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in female pregnancy IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within fever generation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in inflammatory response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intestine smooth muscle contraction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intestine smooth muscle contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in maternal process involved in parturition IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of calcium ion transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of circadian sleep/wake cycle, wakefulness IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of forebrain neuron differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of gastric acid secretion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of gastrin-induced gastric acid secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of insulin secretion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of norepinephrine secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of potassium ion transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of small intestine smooth muscle contraction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within phospholipase C-activating G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of calcitonin secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of circadian sleep/wake cycle, non-REM sleep IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of colon smooth muscle contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of cytosolic calcium ion concentration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of cytosolic calcium ion concentration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of cytosolic calcium ion concentration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of fever generation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of gastric mucosal blood circulation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of inhibitory G protein-coupled receptor phosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of mucus secretion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of myofibroblast contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of neutrophil extravasation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of protein phosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of smooth muscle contraction involved in micturition IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of substance P secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of urine volume ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of vasoconstriction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in prostaglandin receptor internalization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in receptor internalization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of circadian sleep/wake cycle, wakefulness IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of norepinephrine secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to estradiol IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within response to lipopolysaccharide ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to progesterone IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to salt IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to xenobiotic stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in urinary bladder smooth muscle contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in brush border membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell surface IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nuclear membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in proximal neuron projection IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    prostaglandin E2 receptor EP3 subtype
    Names
    PGE receptor, EP3 subtype
    PGE2 receptor EP3 subtype
    prostaglandin E receptor 3 (subtype EP3)
    prostanoid EP3 receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_012704.1NP_036836.1  prostaglandin E2 receptor EP3 subtype

      See identical proteins and their annotated locations for NP_036836.1

      Status: PROVISIONAL

      Source sequence(s)
      D29969
      UniProtKB/TrEMBL
      A6HWS8, A6HWT0, G3V7D9
      Related
      ENSRNOP00000102793.1, ENSRNOT00000171890.1
      Conserved Domains (1) summary
      pfam00001
      Location:42323
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      249264985..249409966
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039101758.2XP_038957686.1  prostaglandin E2 receptor EP3 subtype isoform X4

      UniProtKB/Swiss-Prot
      P34980, Q63194, Q64376
      Related
      ENSRNOP00000111351.1, ENSRNOT00000125616.1
      Conserved Domains (2) summary
      cd14964
      Location:2753
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:26335
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    2. XM_039101754.2XP_038957682.1  prostaglandin E2 receptor EP3 subtype isoform X1

      UniProtKB/TrEMBL
      A6HWT0
      Related
      ENSRNOP00000014034.6, ENSRNOT00000014034.9
      Conserved Domains (2) summary
      cd14964
      Location:2753
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:26335
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    3. XM_006233535.5XP_006233597.1  prostaglandin E2 receptor EP3 subtype isoform X2

      See identical proteins and their annotated locations for XP_006233597.1

      UniProtKB/Swiss-Prot
      P34980, Q63194, Q64376
      UniProtKB/TrEMBL
      A0A0G2JSK4, A6HWS9
      Related
      ENSRNOP00000014126.3, ENSRNOT00000014126.7
      Conserved Domains (2) summary
      cd14964
      Location:2753
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:26335
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    4. XM_039101757.2XP_038957685.1  prostaglandin E2 receptor EP3 subtype isoform X3

      UniProtKB/TrEMBL
      A6HWT0
      Related
      ENSRNOP00000111877.1, ENSRNOT00000156665.1
      Conserved Domains (2) summary
      cd14964
      Location:2753
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:26335
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    RNA

    1. XR_010063583.1 RNA Sequence