Tvp23a trans-golgi network vesicle protein 23 homolog A [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Tvp23aprovided by RGD
Official Full Name: trans-golgi network vesicle protein 23 homolog Aprovided by RGD
Primary source: RGD:1566405
See related: EnsemblRapid:ENSRNOG00000079813 AllianceGenome:RGD:1566405
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Fam18a; RGD1566405
Summary: Predicted to be involved in protein secretion and vesicle-mediated transport. Predicted to be active in Golgi membrane. Orthologous to human TVP23A (trans-golgi network vesicle protein 23 homolog A). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Brain (RPKM 50.5), Thymus (RPKM 21.2) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 10q11

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	10	NC_086028.1 (5734100..5770002)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	10	NC_051345.1 (5227198..5263185)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	10	NC_005109.4 (5300319..5335160)

Chromosome 10 - NC_086028.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in protein secretion	IBA Inferred from Biological aspect of Ancestor more info
involved_in vesicle-mediated transport	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in Golgi membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Golgi apparatus membrane protein TVP23 homolog A

Names: family with sequence similarity 18, member A; trans-golgi network vesicle protein 23A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001108263.3 → NP_001101733.1 Golgi apparatus membrane protein TVP23 homolog A isoform 1

See identical proteins and their annotated locations for NP_001101733.1

Status: VALIDATED

Source sequence(s)

JAXUCZ010000010

UniProtKB/TrEMBL

A6K4K0

Conserved Domains (1) summary

pfam05832
Location:39 → 180

DUF846; Eukaryotic protein of unknown function (DUF846)
NM_001393687.2 → NP_001380616.1 Golgi apparatus membrane protein TVP23 homolog A isoform 2

Status: VALIDATED

Source sequence(s)

JAXUCZ010000010

Related

ENSRNOP00000110455.1, ENSRNOT00000145927.1