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    Fbxo24 F-box protein 24 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 304374, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Fbxo24provided by RGD
    Official Full Name
    F-box protein 24provided by RGD
    Primary source
    RGD:1305095
    See related
    EnsemblRapid:ENSRNOG00000024922 AllianceGenome:RGD:1305095
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human FBXO24 (F-box protein 24). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 48.7), Thymus (RPKM 16.1) and 5 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Fbxo24 in Genome Data Viewer
    Location:
    12q12
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (24709449..24719851)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (19072668..19083067)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (22138460..22153670)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene Sin3A-associated protein 25 Neighboring gene leucine rich repeats and calponin homology domain containing 4 Neighboring gene procollagen C-endopeptidase enhancer Neighboring gene motile sperm domain containing 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    F-box only protein 24

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001107130.2 → NP_001100600.2  F-box only protein 24

      See identical proteins and their annotated locations for NP_001100600.2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000012
      UniProtKB/TrEMBL
      D4A3S1
      Related
      ENSRNOP00000109787.1, ENSRNOT00000156274.1
      Conserved Domains (2) summary
      pfam00415
      Location:387 → 433
      RCC1; Regulator of chromosome condensation (RCC1) repeat
      pfam12937
      Location:53 → 95
      F-box-like; F-box-like

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      24709449..24719851
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017598324.3 → XP_017453813.1  F-box only protein 24 isoform X1

      Related
      ENSRNOP00000035627.6, ENSRNOT00000038397.7
      Conserved Domains (2) summary
      pfam00415
      Location:364 → 410
      RCC1; Regulator of chromosome condensation (RCC1) repeat
      pfam12937
      Location:30 → 72
      F-box-like; F-box-like

    2. XM_063271279.1 → XP_063127349.1  F-box only protein 24 isoform X3

    3. XM_039089413.2 → XP_038945341.1  F-box only protein 24 isoform X2

      Conserved Domains (2) summary
      pfam00415
      Location:370 → 410
      RCC1; Regulator of chromosome condensation (RCC1) repeat
      pfam12937
      Location:53 → 93
      F-box-like

    RNA

    1. XR_005491623.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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