Zg16b zymogen granule protein 16B [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Zg16bprovided by RGD
Official Full Name: zymogen granule protein 16Bprovided by RGD
Primary source: RGD:1562673
See related: EnsemblRapid:ENSRNOG00000057127 AllianceGenome:RGD:1562673
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Sbpl; RGD1562673
Summary: Predicted to be involved in cell migration. Predicted to be located in apicolateral plasma membrane; cytoplasm; and extracellular region. Orthologous to human ZG16B (zymogen granule protein 16B). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Uterus (RPKM 3.7), Testes (RPKM 3.5) and 3 other tissues See more
Orthologs: human all
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Genomic context

Location:: 10q12

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	10	NC_086028.1 (13484327..13488745, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	10	NC_051345.1 (12970888..12984170, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	10	NC_005109.4 (13320716..13325134, complement)

Chromosome 10 - NC_086028.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables carbohydrate binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in cell migration	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
located_in apicolateral plasma membrane	ISO Inferred from Sequence Orthology more info
located_in cytoplasm	ISO Inferred from Sequence Orthology more info
located_in extracellular region	ISO Inferred from Sequence Orthology more info
is_active_in extracellular space	IBA Inferred from Biological aspect of Ancestor more info
located_in plasma membrane	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: pancreatic adenocarcinoma up-regulated factor

Names: spermine binding protein-like; zymogen granule protein 16 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001108823.2 → NP_001102293.2 pancreatic adenocarcinoma up-regulated factor precursor

Status: VALIDATED

Source sequence(s)

JAXUCZ010000010

Related

ENSRNOP00000074401.3, ENSRNOT00000080810.3

Conserved Domains (1) summary

cd09611
Location:22 → 150

Jacalin_ZG16_like; Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins