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    Gpr160 G protein-coupled receptor 160 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 499588, updated on 9-Dec-2024

    Summary

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    Symbol
    Gpr160provided by RGD
    Full Name
    G protein-coupled receptor 160provided by RGD
    Primary source
    RGD:1560200
    See related
    EnsemblRapid:ENSRNOG00000009487 AllianceGenome:RGD:1560200
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Orthologous to human GPR160 (G protein-coupled receptor 160). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 159.5), Lung (RPKM 153.8) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Gpr160 in Genome Data Viewer
    Location:
    2q24
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (114414084..114491590, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (112483364..112563072, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (116105110..116162036, complement)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134485611 Neighboring gene polyhomeotic homolog 3 Neighboring gene uncharacterized LOC120100793 Neighboring gene uncharacterized LOC134485610 Neighboring gene SEC62 homolog, preprotein translocation factor Neighboring gene uncharacterized LOC120100794 Neighboring gene sterile alpha motif domain containing 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Overcoming Stress, Hunger, and Pain: Cocaine- and Amphetamine-Regulated Transcript Peptide's Promise. Samson WK, et al. Endocrinology, 2021 Aug 1. PMID 34043767, Free PMC Article
    2. Structural basis for endosomal trafficking of diverse transmembrane cargos by PX-FERM proteins. Ghai R, et al. Proc Natl Acad Sci U S A, 2013 Feb 19. PMID 23382219, Free PMC Article
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Overcoming Stress, Hunger, and Pain: Cocaine- and Amphetamine-Regulated Transcript Peptide's Promise.
      Title: Overcoming Stress, Hunger, and Pain: Cocaine- and Amphetamine-Regulated Transcript Peptide's Promise.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
    		  
    part_of receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of receptor complex ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    probable G-protein coupled receptor 160

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025147.1 → NP_001020318.1  probable G-protein coupled receptor 160

      See identical proteins and their annotated locations for NP_001020318.1

      Status: PROVISIONAL

      Source sequence(s)
      BC082060
      UniProtKB/Swiss-Prot
      Q66H29
      UniProtKB/TrEMBL
      A6IHK8

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      114414084..114491590 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063282357.1 → XP_063138427.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      Q66H29
      UniProtKB/TrEMBL
      A6IHK8

    2. XM_063282356.1 → XP_063138426.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      Q66H29
      UniProtKB/TrEMBL
      A6IHK8

    3. XM_039102870.2 → XP_038958798.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      Q66H29
      UniProtKB/TrEMBL
      A6IHK8
      Related
      ENSRNOP00000083260.1, ENSRNOT00000098622.2

    4. XM_039102869.2 → XP_038958797.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      Q66H29
      UniProtKB/TrEMBL
      A6IHK8

    5. XM_063282358.1 → XP_063138428.1  probable G-protein coupled receptor 160 isoform X2

      Related
      ENSRNOP00000094006.2, ENSRNOT00000119583.2

    6. XM_039102868.2 → XP_038958796.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      Q66H29
      UniProtKB/TrEMBL
      A6IHK8
      Related
      ENSRNOP00000085494.1, ENSRNOT00000105412.2

    7. XM_063282359.1 → XP_063138429.1  probable G-protein coupled receptor 160 isoform X2

    8. XM_039102867.2 → XP_038958795.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      Q66H29
      UniProtKB/TrEMBL
      A6IHK8

    9. XM_008760935.4 → XP_008759157.1  probable G-protein coupled receptor 160 isoform X1

      See identical proteins and their annotated locations for XP_008759157.1

      UniProtKB/Swiss-Prot
      Q66H29
      UniProtKB/TrEMBL
      A6IHK8

    10. XM_039102865.2 → XP_038958793.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      Q66H29
      UniProtKB/TrEMBL
      A6IHK8

    11. XM_039102866.2 → XP_038958794.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      Q66H29
      UniProtKB/TrEMBL
      A6IHK8
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q66H29.1 GenPept UniProtKB/Swiss-Prot:Q66H29

    Gene LinkOut

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