Otud1 OTU deubiquitinase 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Otud1provided by RGD
Official Full Name: OTU deubiquitinase 1provided by RGD
Primary source: RGD:1563344
See related: EnsemblRapid:ENSRNOG00000016950 AllianceGenome:RGD:1563344
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1563344
Summary: Predicted to enable cysteine-type deubiquitinase activity. Predicted to be involved in protein K63-linked deubiquitination. Orthologous to human OTUD1 (OTU deubiquitinase 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: 17q12.3

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	17	NC_086035.1 (87168248..87171098)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	17	NC_051352.1 (82259920..82262770)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	17	NC_005116.4 (86406643..86410670)

Chromosome 17 - NC_086035.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH143754 (e-PCR)
- UniSTS:233000

BI294581 (e-PCR)
- UniSTS:246088

RH135024 (e-PCR)
- UniSTS:218301

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables cysteine-type deubiquitinase activity	IBA Inferred from Biological aspect of Ancestor more info
enables cysteine-type deubiquitinase activity	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in protein K63-linked deubiquitination	ISO Inferred from Sequence Orthology more info
involved_in proteolysis	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: OTU domain-containing protein 1

Names: OTU domain containing 1

NP_001387701.1

EC 3.4.19.12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.